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Convert ChromatinContacts to tibble

Source: R/AllGenerics.R, R/coerce.R
as_tibble.Rd

Converts interaction or feature data from ChromatinContacts to tibble.

Usage

as_tibble(x, which = "interactions")

# S4 method for class 'ChromatinContacts'
as_tibble(
  x,
  which = c("interactions", "compartments", "TADs", "loops", "multi_contacts")
)

Arguments

x

ChromatinContacts object.

which

Character. Data to convert: "interactions" (default), or feature name ("TADs", "loops", "compartments", "multi_contacts").

Value

Tibble with requested data.

Examples

if (FALSE) { # \dontrun{
cc <- ChromatinContacts("sample.cool") |> import()
df <- as_tibble(cc)
tads_df <- as_tibble(cc, which = "TADs")
} # }