Get hypergraph data from MultiWayContacts object

Retrieves the selected or tidied hypergraph data from a MultiWayContacts object.

Usage

hypergraphData(x, which = c("selected", "tidied"))

# S4 method for class 'MultiWayContacts'
hypergraphData(x, which = c("selected", "tidied"))

Arguments

x

A MultiWayContacts object.

which

Character. Which hypergraph data to retrieve: "selected" (default) returns the selected subset for visualization, "tidied" returns the full tidied long-format data.

Value

A data.frame containing hypergraph data in long format, or NULL if the requested data has not been computed yet.

Details

• which = "selected": Returns data from select(), a subset of hyperedges chosen for visualization. Use this for plotting.

• which = "tidied": Returns data from tidy(), the full hypergraph in long format. Use this for analysis.

Examples

if (FALSE) { # \dontrun{
mc <- MultiWayContacts("sample.pairs.gz") |>
  import() |>
  build(bin_size = 1e6, min_multiway = 3) |>
  tidy(max_hyperedges = 100) |>
  select(n = 50)

# Get selected hyperedges for plotting
df <- hypergraphData(mc, "selected")

# Get full tidied data for analysis
df_full <- hypergraphData(mc, "tidied")
} # }